F. varium 27725_FusoPortal_Gene_949

InterPro predicted function: "CarD-like/TRCF domain;DEAD/DEAH box helicase domain;Transcription-repair-coupling factor
InterPro Accessions: IPR003711;IPR011545;IPR005118;IPR001650

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_949.out

Amino Acids: 983

ORF FASTA file - Amino Acids

MITEYRGRIPFWLKEIKGNIVYLCSSNKNIEDYYNTLSDFYDGKILKIESSYEDEEFEKI NYDLLKLLKSKNKFIILISLEAFLRDYSLEGDKLSFQKGKEMNLGKIQENLIKNKYDKVY MIEKRMQYSVRGDILDIFSRDGDYPVRIEFFGDEIERITYFDIETQKSIENLDNINVYIN NNKDEKLSFSELIEKNKIKGLKKYFENNELLRYKLEEIILRERDEEEKFRRRFYKMIETA EEIEIKRFSEEEIKKFEDYEYIKKLSEKEKILLMSEEEKRYKEIFENYNIEIERYPHYEG YREKGRLILTDRELKGIKVKREAKEKVNLKYKDVSQIRENDFIIHENYGVGIYQGIETMN GQDYLKIKYADEDKLFVPVEGINKIEKYVSTPGVVPDIYQLGRRGFKRKRQKLEEEMIIF AKEIIEIQAKRAFEKGYVFSHDTVWQEEFEESFPYKETASQLKAIEDVKRDMESDRIMDR VICGDVGYGKTEIALRAAFKASIDGKQVVVMVPTTVLAQQHYERFTERFKNYPVNIEILS RLKSEKEQKEVLNKIAAGTVDIVIGTHRILSSDVKFKDLGLVVIDEEQKFGVKAKEQLKK LKNKIDMITLTATPIPRTLNLSLLGIRDLSVIDTPPEGRKPIETVFIEKDDKKIKEIIMS EIAREGQVFYIFNSVKNIEKKTNELRKILPSYLKLDYIHGQMLPKEIKNKIKDFENGDID MLVSTTIVENGIDIENANTMIIDGVEKLGLSQIYQLRGRIGRGRRKGYCYLLTKEYQTKK AKEREESIKNLGDSGGGFQLSLEDMRIRGAGEILGDRQHGALETFGYNLYIKMLNEEIQR IKGNAPEEEMEMEIKINMPAFIPDEYIEKDEKIVIYRRVAELKTQDELKELENEVRDRFG NPPREVINLFYYIRIKLKAKEFGISVIRQEEEGFFIRFLSEKVNIEKISQMMKMGNLKYL SKEEGVFYKGNIDRFFNEYEGAM

Coding DNA - Genome Coordinates: 1038753-1041704 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATAACAGAATACAGAGGGAGGATTCCCTTTTGGCTCAAAGAAATAAAAGGAAATATAGTATATTTAT GTTCATCTAATAAAAACATTGAGGACTATTACAATACTCTCAGTGATTTTTATGATGGAAAAATTTTAAA AATTGAAAGTAGTTATGAAGATGAAGAATTTGAAAAAATTAACTATGATCTCCTTAAACTTTTAAAGTCA AAAAATAAATTTATAATACTTATATCCCTTGAAGCATTTCTCAGAGATTATTCTTTAGAGGGAGATAAAC TTTCTTTTCAAAAAGGAAAAGAAATGAATTTAGGAAAAATACAGGAAAATCTTATAAAGAATAAATATGA TAAGGTATATATGATTGAGAAAAGAATGCAGTATAGTGTAAGGGGAGATATACTTGATATTTTTTCAAGA GATGGAGATTATCCTGTAAGAATTGAATTTTTTGGAGATGAGATAGAGAGAATAACATATTTTGATATTG AAACTCAAAAGAGTATTGAAAATCTTGATAATATCAATGTGTATATAAACAATAATAAAGATGAGAAATT ATCTTTTTCTGAATTGATTGAAAAAAATAAAATAAAAGGTTTAAAGAAATATTTTGAGAATAATGAACTA CTGAGATATAAACTGGAAGAAATTATACTCAGAGAAAGAGATGAAGAAGAAAAATTTAGAAGAAGATTTT ATAAAATGATTGAAACTGCTGAAGAGATAGAAATAAAAAGATTTTCAGAGGAAGAAATAAAAAAGTTTGA GGATTACGAGTATATCAAAAAATTGAGTGAAAAAGAAAAGATTCTTTTAATGTCAGAGGAGGAAAAGAGA TATAAGGAGATATTTGAAAACTATAATATTGAGATAGAGAGATATCCTCATTATGAAGGATATAGAGAAA AAGGCAGGCTTATACTCACTGACAGAGAACTAAAAGGAATCAAAGTAAAGAGAGAAGCAAAGGAAAAGGT AAATTTAAAATATAAAGATGTATCTCAAATCAGAGAAAATGACTTTATAATTCATGAAAATTATGGAGTA GGTATCTATCAAGGGATAGAAACTATGAATGGACAGGATTATTTAAAGATAAAGTATGCTGATGAAGATA AACTTTTTGTCCCTGTTGAAGGAATAAATAAGATTGAAAAATATGTATCTACTCCTGGGGTAGTACCTGA CATATATCAACTTGGAAGAAGAGGATTCAAAAGAAAAAGACAGAAATTGGAAGAGGAAATGATAATCTTT GCTAAAGAAATTATTGAAATACAAGCAAAGAGAGCCTTTGAAAAGGGATATGTTTTTTCTCATGATACAG TCTGGCAAGAGGAATTTGAGGAAAGTTTTCCATATAAGGAAACAGCATCTCAGCTGAAAGCCATAGAAGA TGTAAAAAGAGATATGGAGTCTGACAGAATAATGGACAGAGTAATCTGTGGAGATGTAGGTTATGGAAAA ACTGAAATAGCTTTAAGAGCAGCTTTTAAAGCTTCTATTGATGGAAAACAGGTAGTTGTAATGGTACCTA CAACAGTTCTTGCCCAACAGCACTATGAGAGGTTTACAGAAAGATTTAAAAATTATCCTGTAAATATTGA GATACTAAGTAGATTAAAAAGTGAAAAAGAACAGAAAGAAGTATTAAATAAAATAGCTGCTGGAACTGTT GATATAGTAATAGGAACTCACAGAATTTTATCATCAGATGTAAAATTTAAAGACTTGGGACTTGTAGTAA TAGATGAGGAACAAAAATTTGGAGTGAAAGCCAAGGAGCAGTTAAAGAAATTAAAAAACAAAATAGATAT GATAACTCTTACAGCTACACCAATTCCAAGAACATTAAATCTTTCATTGCTGGGAATAAGAGATTTATCT GTAATAGACACTCCTCCAGAGGGAAGAAAGCCTATTGAAACAGTGTTTATAGAAAAAGATGATAAAAAAA TTAAAGAGATAATTATGAGTGAAATAGCAAGGGAAGGTCAGGTTTTCTATATATTTAATTCTGTAAAAAA TATAGAAAAGAAAACTAATGAACTTAGAAAAATTCTTCCAAGTTATTTAAAATTAGACTATATACATGGT CAAATGCTGCCAAAAGAGATAAAAAATAAGATAAAAGATTTTGAAAATGGTGATATAGATATGCTCGTTT CTACTACTATAGTTGAAAATGGTATTGATATAGAAAATGCTAATACTATGATAATTGATGGAGTAGAAAA GCTTGGACTTTCCCAAATATATCAGTTAAGAGGACGTATAGGTAGGGGAAGAAGAAAGGGCTACTGTTAT CTTCTTACTAAAGAATATCAGACTAAAAAAGCTAAAGAAAGAGAGGAATCTATAAAAAATCTTGGAGATT CAGGTGGAGGATTCCAGTTATCACTTGAAGATATGAGAATAAGAGGAGCTGGGGAAATATTAGGAGATAG ACAACATGGTGCTCTTGAAACATTTGGCTATAATCTCTATATTAAGATGTTAAATGAAGAAATACAGCGT ATAAAAGGAAATGCTCCAGAAGAAGAGATGGAAATGGAGATAAAAATTAATATGCCTGCCTTTATTCCAG ATGAATATATTGAAAAAGATGAAAAAATAGTTATCTACAGAAGAGTAGCAGAATTGAAAACTCAAGATGA GTTAAAGGAATTAGAGAATGAAGTAAGGGATAGATTTGGAAATCCTCCAAGGGAAGTTATCAATCTCTTC TATTATATAAGAATTAAGCTAAAAGCAAAAGAATTTGGAATCTCAGTAATCAGACAAGAGGAAGAGGGGT TCTTCATAAGATTTTTGAGCGAAAAAGTTAATATAGAAAAAATATCTCAAATGATGAAAATGGGGAATTT AAAATATTTGAGTAAAGAAGAAGGAGTATTCTATAAAGGAAATATTGATAGATTTTTCAATGAATATGAG GGAGCGATGTAA

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