F. varium 27725_FusoPortal_Gene_972

InterPro predicted function: "GGDEF domain;EAL domain;Signal transduction response regulator
InterPro Accessions: IPR000160;IPR001633;IPR001789

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_972.out

Amino Acids: 867

ORF FASTA file - Amino Acids

MPIRKQVLIVDDNHMNRMILKNILSSTYNVIQAENGQKALEILKKEKEKISAIFLDIVMP VMDGYTFLAHKMKDGELIHIPVIVTTQYEDEATEVEALSRGAADFLVKPYRPAIILHRLA NIIKMRESSSFINKIEKDSLTGIYNKDFFYFKTTTFFKDLSKKNYYIVFADIERFKLVND TYGSKEGDRLLKYTADIINEEINGYGICGRAEADHFIICVVDIADIEGLLENISKRVSEF NKNMNIVIHYGIYQVEDRSISIELMCDRAMIAASTVKNKYDKKFAYYDDSIRKKLLQEQM LINDMRTSLAERRFKVFYQPKYDFKTEKIVGVEALVRWDHPKLGMVSPGVFIELFERNGF ITEIDYFVWEEACKKLKEWTDNGYKNLSISVNVSRINLYNNNLPNLLIELVKKYNISPKS LHLEITESAYTENSEQIIEGAERLKKIGFIIEMDDFGTGYSSLNMLAKLPIDVLKLDMGF VHSIEKDKNSLILLKVIINLAKELQLAIVAEGVETNKQVNILKNIGCQYAQGYYYSPPIS EEKLDKIFIENNSIISLGKTGELLNLKDKELFEVAYSDEIDLNIKKMIYDLKYHSEHDPL TGLLNRRELKERVNKILENNDIEGTFIIIDIDNFKRINDRYGHVKGDEILKEISEKLKNS FSKIDSISRLGGDEFVVFTLGSTDESRIELMMNNFFEMIKKIKIDIPITCSAGICFSSKS IDYDSLYYNADMALLSAKISGKNNYKIYTEKMEKYSPINHLKNVEWVLDQIFEMVFISDA ETYEVMYINKPTCEKLGKSREECLGKKCHSLMWKSSIPCERCCKISNCIEKFYTEETKLD DGTSIQIKAKMVEWEGNKYKIHYLNKI

Coding DNA - Genome Coordinates: 1070903-1073506 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGCCCATAAGGAAACAGGTATTGATAGTTGATGATAATCATATGAATCGTATGATATTAAAGAATATTT TAAGCTCTACTTACAATGTTATACAAGCAGAAAATGGACAGAAAGCTCTGGAAATATTAAAGAAAGAAAA GGAAAAAATTTCAGCAATATTTCTTGATATAGTTATGCCAGTAATGGACGGATATACCTTTTTAGCTCAT AAAATGAAAGATGGAGAGTTGATTCATATACCTGTAATAGTAACTACTCAATATGAAGATGAGGCCACTG AGGTGGAAGCTTTATCAAGAGGAGCAGCAGACTTTTTAGTAAAGCCTTATAGACCAGCTATTATTCTTCA TAGACTTGCTAATATTATCAAAATGCGTGAATCATCTTCTTTTATAAATAAAATAGAAAAAGACAGTTTG ACTGGGATATATAATAAAGATTTCTTTTATTTTAAGACTACAACTTTTTTTAAAGATTTATCAAAAAAAA ATTATTATATTGTATTTGCAGATATAGAAAGATTTAAGCTTGTAAATGATACATATGGAAGCAAAGAAGG AGATAGACTGCTGAAGTATACAGCAGATATAATTAATGAAGAGATAAATGGATATGGGATATGTGGAAGA GCAGAAGCAGACCATTTTATCATATGTGTTGTTGATATAGCAGATATAGAAGGACTTCTGGAAAATATCT CTAAAAGGGTATCAGAATTTAATAAAAATATGAATATAGTCATACATTATGGAATATATCAAGTAGAGGA TAGAAGTATTTCAATTGAATTGATGTGTGATAGAGCTATGATAGCTGCAAGTACAGTAAAAAATAAGTAT GATAAAAAATTTGCGTATTATGATGACTCCATTCGTAAAAAACTTCTTCAAGAGCAAATGTTGATAAATG ATATGAGAACTTCTCTTGCTGAAAGAAGATTTAAGGTATTTTATCAGCCGAAATATGATTTTAAAACTGA AAAAATAGTAGGAGTAGAGGCATTGGTAAGATGGGATCACCCTAAGCTGGGAATGGTATCTCCTGGAGTA TTTATAGAGCTTTTTGAAAGAAATGGATTTATTACAGAGATAGATTATTTTGTTTGGGAGGAAGCTTGTA AAAAATTGAAAGAGTGGACAGATAACGGCTACAAAAATCTTTCTATTTCAGTAAATGTATCTCGTATAAA TCTATACAACAATAATCTTCCTAATTTATTAATAGAATTAGTAAAAAAATATAATATATCTCCAAAATCT TTACATCTTGAAATAACAGAATCTGCTTATACAGAAAATTCAGAACAAATAATAGAAGGAGCTGAAAGGC TTAAGAAGATTGGATTTATAATAGAAATGGACGACTTTGGAACTGGATATTCATCTTTAAATATGCTGGC AAAGCTACCTATAGACGTTTTAAAATTAGATATGGGATTTGTACACAGCATAGAAAAAGATAAAAACAGC CTCATTCTGCTTAAAGTAATAATAAATTTGGCAAAAGAACTACAGTTAGCAATAGTGGCTGAAGGGGTGG AAACAAATAAACAAGTGAATATCCTTAAAAATATAGGGTGCCAGTATGCACAAGGATATTACTATTCTCC ACCTATATCAGAAGAAAAATTAGATAAGATTTTTATTGAAAATAATTCTATAATATCTTTGGGTAAAACA GGGGAATTATTAAATTTAAAAGATAAGGAATTGTTTGAGGTGGCATATTCAGATGAAATTGATTTGAATA TAAAGAAGATGATTTATGATTTGAAATACCACTCAGAGCATGATCCTTTAACAGGGCTTCTCAATAGAAG AGAACTAAAAGAAAGAGTTAATAAAATATTGGAAAATAATGATATAGAAGGTACTTTTATAATTATTGAC ATTGATAATTTTAAAAGAATAAATGATAGATATGGACATGTAAAGGGAGATGAAATACTTAAAGAGATAT CAGAGAAGTTGAAAAACAGTTTTTCTAAAATAGACAGTATTTCAAGATTAGGTGGTGATGAATTTGTAGT ATTCACACTAGGAAGCACTGATGAAAGTAGAATAGAACTTATGATGAATAATTTTTTTGAAATGATAAAA AAGATAAAAATAGATATTCCAATAACTTGTTCAGCAGGTATCTGTTTTTCTTCTAAATCTATTGACTATG ATTCATTATATTATAATGCAGATATGGCACTCCTTTCAGCAAAAATTTCTGGAAAAAATAACTACAAAAT TTATACAGAAAAAATGGAAAAATATTCTCCTATTAATCATTTAAAAAATGTAGAATGGGTATTGGATCAG ATTTTTGAAATGGTATTTATTTCTGATGCTGAAACTTATGAAGTTATGTATATCAATAAACCTACTTGTG AAAAATTAGGAAAAAGCAGAGAAGAATGTCTGGGGAAAAAATGCCATTCTCTTATGTGGAAGTCATCTAT ACCATGTGAAAGGTGTTGTAAGATTTCAAACTGTATAGAAAAATTTTATACTGAAGAAACAAAATTAGAT GATGGAACTTCTATTCAAATTAAGGCTAAAATGGTTGAATGGGAAGGAAATAAATATAAAATACATTATT TAAATAAAATTTAA

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