F. varium 27725_FusoPortal_Gene_2236

InterPro predicted function: Periplasmic binding protein/LacI sugar binding domain;LacI-type HTH domain
InterPro Accessions: IPR001761;IPR000843

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2236.out

Amino Acids: 321

ORF FASTA file - Amino Acids

MNMKDIAAHLGISVATVSRAINGSENINLETKERILAFVEKKGYTPNVIARNLSKMENNT IALLVPNISNPFFASLINNICANFAKSDYQIALYNTSEDIELEKKAIKNIIGQRIAGVIA ILINGKYEENPLLPLINYNIPVFLLDRDIRDYTLPGVFLDNYIGAYKVVTELLKRGHKDI AIITGDLSSLTAEERLKGYIKAHEDMNIPYSKANIYEGNFLLESGYEAGKKILNSSATAV FASNNLMLLGFLKTMKVIGKEIELSCFEEIEYLQVLGINVICCKIPLDVMGEKTYSLFFT DKSKRKKIYIEPILIKNRKEF

Coding DNA - Genome Coordinates: 2460505-2459540 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAATATGAAAGACATTGCAGCTCATCTTGGAATTTCAGTAGCCACTGTTTCCAGAGCTATCAATGGAA GTGAAAACATAAACCTTGAAACTAAAGAGAGAATTTTAGCCTTCGTAGAAAAAAAGGGGTATACTCCAAA TGTTATTGCAAGAAATCTTTCTAAAATGGAAAATAATACTATTGCTCTTTTAGTTCCTAATATCAGCAAT CCTTTTTTTGCATCACTTATTAATAATATATGTGCAAATTTTGCTAAAAGCGATTATCAAATAGCTCTTT ATAATACATCTGAGGATATTGAATTAGAAAAAAAAGCTATAAAAAATATAATTGGACAAAGAATAGCCGG AGTTATTGCTATTCTCATCAATGGTAAATATGAAGAAAATCCCCTTCTCCCACTTATCAACTACAATATT CCTGTTTTTCTTTTAGACAGAGATATCAGAGATTATACTCTCCCTGGAGTATTTCTTGATAATTACATAG GAGCATACAAAGTAGTTACTGAATTATTAAAGAGAGGGCATAAGGATATAGCTATTATTACAGGAGATCT TTCATCTCTCACTGCAGAAGAAAGACTAAAAGGATATATAAAAGCTCATGAAGATATGAATATTCCATAT TCTAAAGCAAATATTTATGAAGGTAACTTCCTTTTGGAAAGTGGATATGAAGCAGGTAAGAAGATTTTAA ATTCTTCAGCTACAGCAGTATTTGCTTCTAATAACCTTATGCTTTTAGGATTTTTAAAGACCATGAAAGT TATTGGTAAAGAAATAGAATTATCATGCTTTGAGGAAATAGAATATCTTCAAGTACTTGGAATAAATGTT ATATGTTGTAAAATTCCACTTGATGTAATGGGAGAAAAAACATATTCTCTATTTTTCACAGATAAGAGTA AAAGAAAAAAAATATATATAGAACCTATTTTAATAAAAAATAGAAAGGAGTTTTAA

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